Pseudomonas aeruginosa PAO1, PA1049 (pdxH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004733 pyridoxamine-phosphate oxidase activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 7860596 Reviewed by curator
Molecular Function GO:0010181 FMN binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10851
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004733 pyridoxamine-phosphate oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10851
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008615 pyridoxine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10851
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCyc PYRIDOXSYN-PWY pyridoxal 5'-phosphate biosynthesis I 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae00750 Vitamin B6 metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc pyridoxal 5'-phosphate salvage II (plants) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
PseudoCAP Vitamin B6 metabolism ECO:0000037
not_recorded
PseudoCyc PLPSAL-PWY pyridoxal 5'-phosphate salvage I 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00558 JCVI: pyridoxamine 5'-phosphate oxidase IPR000659 Pyridoxamine 5'-phosphate oxidase 25 215 4.1E-81
PANTHER PTHR10851 PYRIDOXINE-5-PHOSPHATE OXIDASE IPR000659 Pyridoxamine 5'-phosphate oxidase 5 215 1.0E-74
Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal 175 215 1.9E-19
Gene3D G3DSA:2.30.110.10 - IPR012349 FMN-binding split barrel 2 215 2.0E-86
PIRSF PIRSF000190 Pyd_amn-ph_oxd IPR000659 Pyridoxamine 5'-phosphate oxidase 1 215 1.6E-82
Pfam PF01243 Pyridoxamine 5'-phosphate oxidase IPR011576 Pyridoxamine 5'-phosphate oxidase, putative 43 122 1.5E-29
SUPERFAMILY SSF50475 FMN-binding split barrel - - 8 215 2.43E-71
FunFam G3DSA:2.30.110.10:FF:000011 Chromosome 7, whole genome shotgun sequence - - 14 215 3.2E-103
Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. IPR000659 Pyridoxamine 5'-phosphate oxidase 11 215 40.284828

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.