Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0030307 | positive regulation of cell growth | Inferred from Mutant Phenotype | ECO:0000015 mutant phenotype evidence |
10438740 | Reviewed by curator |
Biological Process | GO:0006355 | regulation of transcription, DNA-templated | Inferred from Direct Assay | ECO:0000002 direct assay evidence |
||
Molecular Function | GO:0016987 | sigma factor activity | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
10438740 | Reviewed by curator |
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02937
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006352 | DNA-templated transcription, initiation |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02937
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02937
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:1.10.1740.10 | - | - | - | 2 | 107 | 8.4E-28 |
Coils | Coil | Coil | - | - | 145 | 165 | - |
Pfam | PF04545 | Sigma-70, region 4 | IPR007630 | RNA polymerase sigma-70 region 4 | 108 | 157 | 6.4E-12 |
SUPERFAMILY | SSF88659 | Sigma3 and sigma4 domains of RNA polymerase sigma factors | IPR013324 | RNA polymerase sigma factor, region 3/4-like | 99 | 160 | 1.25E-10 |
PANTHER | PTHR43133 | RNA POLYMERASE ECF-TYPE SIGMA FACTO | IPR039425 | RNA polymerase sigma-70 like | 3 | 159 | 1.5E-34 |
SUPERFAMILY | SSF88946 | Sigma2 domain of RNA polymerase sigma factors | IPR013325 | RNA polymerase sigma factor, region 2 | 3 | 91 | 1.88E-26 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 108 | 162 | 1.2E-12 |
Pfam | PF04542 | Sigma-70 region 2 | IPR007627 | RNA polymerase sigma-70 region 2 | 8 | 75 | 1.9E-19 |
NCBIfam | TIGR02937 | JCVI: sigma-70 family RNA polymerase sigma factor | IPR014284 | RNA polymerase sigma-70 like domain | 4 | 158 | 3.2E-30 |
FunFam | G3DSA:1.10.10.10:FF:000282 | RNA polymerase sigma factor SigX | - | - | 105 | 160 | 2.1E-41 |