Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:1900232 | negative regulation of single-species biofilm formation on inanimate substrate | Inferred from Mutant Phenotype | ECO:0000015 mutant phenotype evidence |
23363478 | Reviewed by curator |
Molecular Function | GO:0004451 | isocitrate lyase activity | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
17319879 | Reviewed by curator |
Biological Process | GO:0009405 | pathogenesis | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
18524916 | Reviewed by curator |
Molecular Function | GO:0004451 | isocitrate lyase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001362
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0019752 | carboxylic acid metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001362
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:cd00377
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
PseudoCyc | P106-PWY | serine-isocitrate lyase pathway | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae01200 | Carbon metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae00630 | Glyoxylate and dicarboxylate metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | GLYOXYLATE-BYPASS | glyoxylate cycle | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | TCA-GLYOX-BYPASS | superpathway of glyoxylate bypass and TCA | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae01120 | Microbial metabolism in diverse environments | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | GLYCOLYSIS-TCA-GLYOX-BYPASS | superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
MetaCyc | TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
CDD | cd00377 | ICL_PEPM | IPR039556 | ICL/PEPM domain | 63 | 386 | 4.5747E-34 |
Pfam | PF00463 | Isocitrate lyase family | IPR006254 | Isocitrate lyase | 330 | 399 | 1.3E-9 |
Pfam | PF00463 | Isocitrate lyase family | IPR006254 | Isocitrate lyase | 429 | 530 | 2.8E-13 |
PIRSF | PIRSF001362 | ICL | IPR006254 | Isocitrate lyase | 1 | 277 | 7.7E-29 |
Gene3D | G3DSA:3.20.20.60 | - | IPR040442 | Pyruvate kinase-like domain superfamily | 2 | 531 | 1.0E-128 |
PIRSF | PIRSF001362 | ICL | IPR006254 | Isocitrate lyase | 294 | 410 | 1.0E-11 |
PANTHER | PTHR21631 | ISOCITRATE LYASE/MALATE SYNTHASE | IPR006254 | Isocitrate lyase | 2 | 531 | 2.8E-130 |
Pfam | PF00463 | Isocitrate lyase family | IPR006254 | Isocitrate lyase | 81 | 269 | 3.5E-20 |
SUPERFAMILY | SSF51621 | Phosphoenolpyruvate/pyruvate domain | IPR015813 | Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily | 10 | 514 | 4.93E-124 |
PIRSF | PIRSF001362 | ICL | IPR006254 | Isocitrate lyase | 412 | 531 | 5.9E-8 |