Pseudomonas aeruginosa PAO1, PA3155 (wbpE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008483 transaminase activity
EXP
Inferred from Experiment
ECO:0000269
experimental evidence used in manual assertion
19282284 Reviewed by curator
Biological Process GO:0006065 UDP-glucuronate biosynthetic process
EXP
Inferred from Experiment
ECO:0000269
experimental evidence used in manual assertion
19282284 Reviewed by curator
Biological Process GO:0000271 polysaccharide biosynthetic process
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
19282284 Reviewed by curator
Biological Process GO:0009243 O antigen biosynthetic process
EXP
Inferred from Experiment
ECO:0000269
experimental evidence used in manual assertion
18621892 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class
Putative enzymes Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP UDP-2,3-diacetamido-2,3-dideoxy-d-mannuronic acid biosynthesis pathway ECO:0000037
not_recorded
KEGG pae00520 Amino sugar and nucleotide sugar metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Lipopolysaccharide biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 14 357 2.1E-117
FunFam G3DSA:3.40.640.10:FF:000089 Aminotransferase, DegT/DnrJ/EryC1/StrS family - - 1 244 2.5E-116
PANTHER PTHR30244 TRANSAMINASE IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 9 358 1.6E-106
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 1 244 9.3E-97
CDD cd00616 AHBA_syn IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 22 357 0.0
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 15 358 3.86E-109
PIRSF PIRSF000390 PLP_StrS IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 1 359 5.9E-104
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 245 359 7.2E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.