Pseudomonas aeruginosa PAO1, PA3363 (amiR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0031564 transcription antitermination
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 8918468 Reviewed by curator
Biological Process GO:0006355 regulation of transcription, DNA-templated
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0015976 carbon utilization
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 2495988 Reviewed by curator
Biological Process GO:0044248 cellular catabolic process
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 2495988 Reviewed by curator
Biological Process GO:0034251 regulation of cellular amide catabolic process
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 2495988 Reviewed by curator
Biological Process GO:0051345 positive regulation of hydrolase activity
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 2513374 Reviewed by curator
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01012
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 145 196 5.5E-24
Coils Coil Coil - - 122 149 -
SMART SM01012 ANTAR_2 IPR005561 ANTAR domain 135 190 3.6E-15
PANTHER PTHR43367 - - - 11 146 2.6E-14
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 5 190 2.49E-43
Gene3D G3DSA:3.40.50.2300 - - - 1 128 4.2E-38
PIRSF PIRSF036382 RR_antiterminator IPR008327 Signal transduction response regulator, antiterminator 2 196 1.4E-51
Pfam PF03861 ANTAR domain IPR005561 ANTAR domain 137 190 1.4E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.