Pseudomonas aeruginosa PAO1, PA3909 (eddB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006308	DNA catabolic process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	20370819	Reviewed by curator
Molecular Function	GO:0004536	deoxyribonuclease activity	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	20370819	Reviewed by curator
Molecular Function	GO:0003824	catalytic activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF03372	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00932	Lamin Tail Domain	IPR001322	Lamin tail domain	21	129	3.1E-15
Gene3D	G3DSA:3.60.10.10	Endonuclease/exonuclease/phosphatase	IPR036691	Endonuclease/exonuclease/phosphatase superfamily	454	767	2.3E-36
CDD	cd10283	MnuA_DNase1-like	-	-	454	767	3.62249E-52
Pfam	PF03372	Endonuclease/Exonuclease/phosphatase family	IPR005135	Endonuclease/exonuclease/phosphatase	457	760	5.6E-8
NCBIfam	NF033681	NCBIFAM: ExeM/NucH family extracellular endonuclease	IPR047971	Extracellular endonuclease ExeM-like	221	769	0.0
PANTHER	PTHR42834	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_3G09210)	-	-	195	769	0.0
FunFam	G3DSA:3.60.10.10:FF:000072	Extracellular nuclease	-	-	454	767	0.0
SUPERFAMILY	SSF56219	DNase I-like	IPR036691	Endonuclease/exonuclease/phosphatase superfamily	452	768	6.62E-36
CDD	cd04486	YhcR_OBF_like	-	-	221	301	2.73461E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.