Pseudomonas aeruginosa PAO1, PA4116 (bphO)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| -35 region | 4603908 | 4603913 | + |
|
Details | |
| RpoS binding site | 4603908 | 4603937 | + |
|
Details | |
| -10 region | 4603931 | 4603937 | + |
|
Details | |
| transcriptional initiation site (+1) | 4603945 | 4603945 | + |
|
Details | |
| transcription initiation site | 4603946 | 4603946 | + |
|
18248420 | Details |
| -10 element (RpoS) | 4603932 | 4603938 | + |
|
18248420 | Details |
| -35 element (RpoS) | 4603909 | 4603915 | + |
|
18248420 | Details |
| LasR/RhlR box | 4603858 | 4603873 | + |
|
18248420 | Details |
| Rho-independent transcription terminator TERM 1058 | 4603900 | 4603932 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1059 | 4603901 | 4603931 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| LasR binding site | 4604596 | 4604611 | + |
|
Details | |
| LasR binding site | 4604597 | 4604612 | + |
ECO:0000314
direct assay evidence used in manual assertion |
19682264 | Details |