Pseudomonas aeruginosa PAO1, PA4117 (bphP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Operons

Operon name: bphOP (2 gene members)
Experiment Attributes
method: RT-PCR
Locus Tag Gene Name Description Start End Strand Type
PA4116 bphO heme oxygenase, BphO 4604006 4604593 + CDS
Gene Details
PA4117 bphP bacterial phytochrome, BphP 4604621 4606807 + CDS
Gene Details
Evidence
Transcription unit experimentally validated in a strain of the same species. The start coordinate will often be based on an experimentally validated transcription start site. For protein-coding genes, unless otherwise specified, the stop will be based on the stop codon.
References
Expression of the phytochrome operon in Pseudomonas aeruginosa is dependent on the alternative sigma factor RpoS.
Barkovits K, Harms A, Benkartek C, Smart JL, Frankenberg-Dinkel N
FEMS Microbiol. Lett. 2008 Mar;280(2):160-8
PubMed ID: 18248420
Cross-References
PseudoCAP: 41708
Operon name: bphO-bphP-PA4118 (3 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA4116 bphO heme oxygenase, BphO 4604006 4604593 + CDS
Gene Details
PA4117 bphP bacterial phytochrome, BphP 4604621 4606807 + CDS
Gene Details
PA4118 hypothetical protein 4606885 4607454 + CDS
Gene Details
Evidence
Computationally-predicted.
References
DOOR: a database for prokaryotic operons.
Mao F, Dam P, Chou J, Olman V, Xu Y
Nucleic Acids Res. 2009 Jan;37(Database issue):D459-63
PubMed ID: 18988623
Cross-References
DOOR: 13945