Pseudomonas aeruginosa PAO1, PA5454 (rmd)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0070402	NADPH binding	EXP Inferred from Experiment	ECO:0000269 experimental evidence used in manual assertion	23341552	Reviewed by curator
Biological Process	GO:0009103	lipopolysaccharide biosynthetic process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	9781879	Reviewed by curator
Biological Process	GO:0009243	O antigen biosynthetic process	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	19459932	Reviewed by curator
Biological Process	GO:0019306	GDP-D-rhamnose biosynthetic process	EXP Inferred from Experiment	ECO:0000269 experimental evidence used in manual assertion	19459932	Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Lipopolysaccharide biosynthesis		ECO:0000037 not_recorded
KEGG	pae00051	Fructose and mannose metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae00520	Amino sugar and nucleotide sugar metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR43000	DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED	-	-	3	299	4.2E-45
Pfam	PF16363	GDP-mannose 4,6 dehydratase	IPR016040	NAD(P)-binding domain	36	291	4.3E-50
Gene3D	G3DSA:3.90.25.10	-	-	-	167	291	3.4E-75
Gene3D	G3DSA:3.40.50.720	-	-	-	4	283	3.4E-75
SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	IPR036291	NAD(P)-binding domain superfamily	3	299	8.06E-68

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.