Pseudomonas fluorescens Pf0-1, Pfl01_1186
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR12818 | UNCHARACTERIZED | IPR040372 | YaeB-like | 5 | 230 | 7.9E-67 |
| Gene3D | G3DSA:3.30.2310.10 | - | - | - | 140 | 228 | 7.8E-20 |
| Pfam | PF18389 | TrmO C-terminal domain | IPR041369 | TrmO, C-terminal | 158 | 219 | 8.5E-19 |
| CDD | cd09281 | UPF0066 | IPR023370 | TrmO-like, N-terminal domain | 10 | 136 | 7.88833E-61 |
| NCBIfam | TIGR00104 | JCVI: tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | IPR023370 | TrmO-like, N-terminal domain | 4 | 146 | 2.0E-48 |
| Gene3D | G3DSA:2.40.30.70 | - | IPR036414 | YaeB, N-terminal domain superfamily | 1 | 139 | 6.7E-47 |
| Pfam | PF01980 | tRNA-methyltransferase O | IPR023370 | TrmO-like, N-terminal domain | 24 | 141 | 3.0E-46 |
| SUPERFAMILY | SSF118196 | YaeB-like | IPR036413 | YaeB-like superfamily | 4 | 220 | 3.53E-76 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.