Pseudomonas fluorescens Pf0-1, Pfl01_1585
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF48452
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 381 | 400 | - |
| Pfam | PF13432 | Tetratricopeptide repeat | - | - | 138 | 177 | 0.0012 |
| NCBIfam | TIGR03142 | JCVI: c-type cytochrome biogenesis protein CcmI | IPR017560 | Cytochrome c-type biogenesis protein CcmI | 4 | 116 | 1.1E-30 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 133 | 278 | 1.4E-38 |
| Pfam | PF13432 | Tetratricopeptide repeat | - | - | 191 | 254 | 4.6E-6 |
| SUPERFAMILY | SSF48452 | TPR-like | IPR011990 | Tetratricopeptide-like helical domain superfamily | 138 | 248 | 1.39E-14 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 221 | 254 | 8.5 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 371 | 400 | - |
| PANTHER | PTHR47870 | CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMH | - | - | 1 | 79 | 4.0E-57 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 150 | 183 | 0.39 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.