Pseudomonas fluorescens Pf0-1, Pfl01_3442

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07992
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.1060.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfo01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo00410 beta-Alanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo00240 Pyrimidine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo00770 Pantothenate and CoA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IPR028261 Dihydroprymidine dehydrogenase domain II 47 153 9.1E-33
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 302 320 1.8E-19
MobiDBLite mobidb-lite consensus disorder prediction - - 1 22 -
SUPERFAMILY SSF46548 alpha-helical ferredoxin - - 31 177 9.94E-29
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 168 190 1.3E-10
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 298 322 1.3E-10
Gene3D G3DSA:1.10.1060.10 - IPR009051 Alpha-helical ferredoxin 6 164 6.0E-33
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 398 414 1.8E-19
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 165 281 4.9E-28
SUPERFAMILY SSF51971 Nucleotide-binding domain - - 165 407 7.06E-50
SUPERFAMILY SSF51971 Nucleotide-binding domain - - 384 474 1.71E-9
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 427 449 1.8E-19
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 169 188 1.8E-19
MobiDBLite mobidb-lite consensus disorder prediction - - 1 15 -
PANTHER PTHR43073 DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)] - - 42 474 1.0E-69
Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase IPR023753 FAD/NAD(P)-binding domain 167 463 3.3E-32
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 437 455 1.3E-10
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 299 481 1.0E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.