Pseudomonas fluorescens Pf0-1, Pfl01_3927

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01297
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0030001 metal ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01297
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007155 cell adhesion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfo02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53807 Helical backbone metal receptor - - 33 305 4.02E-68
Gene3D G3DSA:3.40.50.1980 Nitrogenase molybdenum iron protein domain - - 33 187 6.3E-39
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 194 215 9.8E-9
CDD cd01017 AdcA - - 32 305 1.46423E-122
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 59 77 2.5E-11
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 78 95 9.8E-9
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 247 265 9.8E-9
PANTHER PTHR42953 HIGH-AFFINITY ZINC UPTAKE SYSTEM PROTEIN ZNUA-RELATED - - 11 306 4.4E-73
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 78 97 2.5E-11
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 136 155 2.5E-11
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 65 78 9.8E-9
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 34 55 2.5E-11
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 283 301 2.5E-11
Pfam PF01297 Zinc-uptake complex component A periplasmic IPR006127 Periplasmic solute binding protein, ZnuA-like 40 302 1.4E-55
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 194 211 2.5E-11
Gene3D G3DSA:3.40.50.1980 Nitrogenase molybdenum iron protein domain - - 188 305 9.7E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.