Pseudomonas fluorescens F113, PSF113_0011 (glyQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004820 glycine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00733
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00733
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006426 glycyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00733
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00733
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00733
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. IPR002310 Glycine-tRNA ligase, alpha subunit 9 295 61.563873
Gene3D G3DSA:3.30.930.10 Bira Bifunctional Protein; Domain 2 IPR045864 Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) 2 216 1.3E-120
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 141 161 5.0E-68
FunFam G3DSA:3.30.930.10:FF:000006 Glycine--tRNA ligase alpha subunit - - 3 216 1.1E-123
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 115 139 5.0E-68
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 84 104 5.0E-68
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 255 271 5.0E-68
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 164 179 5.0E-68
CDD cd00733 GlyRS_alpha_core IPR002310 Glycine-tRNA ligase, alpha subunit 10 294 0.0
Pfam PF02091 Glycyl-tRNA synthetase alpha subunit IPR002310 Glycine-tRNA ligase, alpha subunit 11 292 0.0
SUPERFAMILY SSF55681 Class II aaRS and biotin synthetases IPR045864 Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) 10 293 0.0
NCBIfam TIGR00388 JCVI: glycine--tRNA ligase subunit alpha IPR002310 Glycine-tRNA ligase, alpha subunit 10 301 0.0
PANTHER PTHR30075 GLYCYL-TRNA SYNTHETASE IPR006194 Glycine-tRNA synthetase, heterodimeric 8 305 0.0
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 63 78 5.0E-68
Gene3D G3DSA:1.20.58.180 Class II aaRS and biotin synthetases; domain 2 - - 217 298 3.4E-31

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.