Pseudomonas fluorescens F113, PSF113_0039 (cc4)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46626
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46626
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 22 100 1.8E-25
Pfam PF00034 Cytochrome c IPR009056 Cytochrome c-like domain 26 100 7.6E-8
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 104 202 9.03E-21
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 103 203 9.9E-29
FunFam G3DSA:1.10.760.10:FF:000016 Cytochrome c4 - - 21 102 2.7E-46
PRINTS PR00605 Class IC cytochrome C signature IPR008168 Cytochrome c, class IC 177 199 3.7E-5
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 14 99 7.59E-21
PIRSF PIRSF000005 Cytochrome_c4 IPR024167 Cytochrome c4-like 1 203 3.2E-60
Pfam PF00034 Cytochrome c IPR009056 Cytochrome c-like domain 111 201 4.5E-11
PRINTS PR00605 Class IC cytochrome C signature IPR008168 Cytochrome c, class IC 32 43 3.7E-5
PANTHER PTHR33751 CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT FIXP - - 7 203 1.2E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.