Pseudomonas fluorescens F113, PSF113_0100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.150.240:FF:000017 HAD family hydrolase - - 17 83 1.9E-29
Gene3D G3DSA:3.40.50.1000 - IPR023214 HAD superfamily 6 205 2.3E-61
CDD cd04302 HAD_5NT - - 5 210 5.96735E-105
PANTHER PTHR43434 PHOSPHOGLYCOLATE PHOSPHATASE - - 4 211 3.3E-36
Gene3D G3DSA:1.10.150.240 Putative phosphatase; domain 2 IPR023198 Phosphoglycolate phosphatase-like, domain 2 17 83 2.3E-61
Pfam PF13419 Haloacid dehalogenase-like hydrolase IPR041492 Haloacid dehalogenase-like hydrolase 6 184 2.1E-26
SUPERFAMILY SSF56784 HAD-like IPR036412 HAD-like superfamily 1 212 6.43E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.