Pseudomonas fluorescens F113, PSF113_0504

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02195
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe00540 Lipopolysaccharide biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.2000:FF:000023 ADP-heptose--LPS heptosyltransferase II - - 159 338 2.2E-72
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 159 337 2.3E-51
Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) IPR002201 Glycosyl transferase, family 9 69 318 1.1E-85
NCBIfam TIGR02195 JCVI: lipopolysaccharide heptosyltransferase II IPR011910 ADP-heptose--LPS heptosyltransferase 2 2 337 0.0
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase - - 1 336 1.19E-99
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 2 145 1.4E-37
PANTHER PTHR30160 TETRAACYLDISACCHARIDE 4'-KINASE-RELATED - - 1 337 2.2E-73
FunFam G3DSA:3.40.50.2000:FF:000022 ADP-heptose--LPS heptosyltransferase II - - 2 147 1.5E-79
CDD cd03789 GT9_LPS_heptosyltransferase IPR002201 Glycosyl transferase, family 9 2 335 3.69547E-87

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.