Pseudomonas fluorescens F113, PSF113_1076
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.309.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0016491 | oxidoreductase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF53720
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pfe00330 | Arginine and proline metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pfe00410 | beta-Alanine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | putrescine degradation IV | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | L-lysine degradation X | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | putrescine degradation V | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | pfe01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.605.10 | Aldehyde Dehydrogenase; Chain A, domain 1 | IPR016162 | Aldehyde dehydrogenase, N-terminal | 20 | 464 | 0.0 |
| PANTHER | PTHR11699 | ALDEHYDE DEHYDROGENASE-RELATED | - | - | 3 | 472 | 0.0 |
| Gene3D | G3DSA:3.40.309.10 | Aldehyde Dehydrogenase; Chain A, domain 2 | IPR016163 | Aldehyde dehydrogenase, C-terminal | 249 | 439 | 0.0 |
| Coils | Coil | Coil | - | - | 67 | 87 | - |
| CDD | cd07092 | ALDH_ABALDH-YdcW | IPR015657 | Aminobutyraldehyde dehydrogenase | 21 | 472 | 0.0 |
| FunFam | G3DSA:3.40.605.10:FF:000001 | Aldehyde dehydrogenase 1 | - | - | 15 | 266 | 4.8E-88 |
| SUPERFAMILY | SSF53720 | ALDH-like | IPR016161 | Aldehyde/histidinol dehydrogenase | 2 | 472 | 0.0 |
| FunFam | G3DSA:3.40.309.10:FF:000010 | Gamma-aminobutyraldehyde dehydrogenase | - | - | 249 | 442 | 2.4E-74 |
| Pfam | PF00171 | Aldehyde dehydrogenase family | IPR015590 | Aldehyde dehydrogenase domain | 19 | 470 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.