Pseudomonas fluorescens F113, PSF113_1253 (livF2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015658 branched-chain amino acid transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039137
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015803 branched-chain amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039137
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43820 HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING PROTEIN LIVF - - 1 232 6.1E-110
FunFam G3DSA:3.40.50.300:FF:000341 High-affinity branched-chain amino acid transport ATP-binding protein - - 1 233 2.1E-122
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 2 231 2.77E-61
CDD cd03224 ABC_TM1139_LivF_branched - - 2 223 4.15724E-111
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 26 210 1.2E-6
PIRSF PIRSF039137 ABC_branched_ATPase IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein 1 233 2.7E-104
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 17 161 5.1E-33
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 233 7.6E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.