Pseudomonas fluorescens F113, PSF113_1364

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00933
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00933
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe00460 Cyanoamino acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe00500 Starch and sucrose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00133 Glycosyl hydrolase family 3 signature IPR001764 Glycoside hydrolase, family 3, N-terminal 198 214 1.4E-22
PRINTS PR00133 Glycosyl hydrolase family 3 signature IPR001764 Glycoside hydrolase, family 3, N-terminal 96 112 1.4E-22
FunFam G3DSA:3.40.50.1700:FF:000004 Periplasmic beta-glucosidase - - 376 646 3.6E-119
SUPERFAMILY SSF52279 Beta-D-glucan exohydrolase, C-terminal domain IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily 390 649 4.05E-58
Gene3D G3DSA:3.20.20.300 - IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily 27 367 2.2E-107
PRINTS PR00133 Glycosyl hydrolase family 3 signature IPR001764 Glycoside hydrolase, family 3, N-terminal 161 177 1.4E-22
PRINTS PR00133 Glycosyl hydrolase family 3 signature IPR001764 Glycoside hydrolase, family 3, N-terminal 115 134 1.4E-22
Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain IPR002772 Glycoside hydrolase family 3 C-terminal domain 390 646 4.6E-60
PRINTS PR00133 Glycosyl hydrolase family 3 signature IPR001764 Glycoside hydrolase, family 3, N-terminal 268 286 1.4E-22
Gene3D G3DSA:3.40.50.1700 - IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily 376 646 8.5E-87
Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain IPR001764 Glycoside hydrolase, family 3, N-terminal 42 345 2.1E-87
SUPERFAMILY SSF51445 (Trans)glycosidases IPR017853 Glycoside hydrolase superfamily 30 389 1.9E-101
Pfam PF14310 Fibronectin type III-like domain IPR026891 Fibronectin type III-like domain 684 752 2.3E-18
Gene3D G3DSA:2.60.40.10 Immunoglobulins IPR013783 Immunoglobulin-like fold 647 762 4.9E-32
FunFam G3DSA:2.60.40.10:FF:000495 Periplasmic beta-glucosidase - - 648 763 1.3E-40
SMART SM01217 Fn3_like_2 IPR026891 Fibronectin type III-like domain 683 752 7.1E-28
FunFam G3DSA:3.20.20.300:FF:000005 Periplasmic beta-glucosidase - - 26 367 0.0
PANTHER PTHR30620 PERIPLASMIC BETA-GLUCOSIDASE-RELATED - - 30 646 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.