Pseudomonas fluorescens F113, PSF113_2009 (rbsD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016853 isomerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05025
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0048029 monosaccharide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05025
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016872 intramolecular lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01661
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005996 monosaccharide metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05025
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR37831 D-RIBOSE PYRANASE IPR023064 D-ribose pyranase 1 134 2.1E-43
SUPERFAMILY SSF102546 RbsD-like IPR023750 RbsD-like superfamily 1 134 4.32E-42
Hamap MF_01661 D-ribose pyranase [rbsD]. IPR023064 D-ribose pyranase 1 134 31.050247
Gene3D G3DSA:3.40.1650.10 - IPR023750 RbsD-like superfamily 8 130 4.9E-30
Pfam PF05025 RbsD / FucU transport protein family IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU 1 133 1.6E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.