Pseudomonas fluorescens F113, PSF113_2409 (vgrG)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfe03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.55.50.10	-	-	-	97	188	1.1E-86
Gene3D	G3DSA:4.10.220.110	-	-	-	223	281	1.1E-86
FunFam	G3DSA:2.40.50.230:FF:000002	Type VI secretion protein VgrG	-	-	339	439	3.6E-60
FunFam	G3DSA:3.55.50.10:FF:000001	Actin cross-linking toxin VgrG1	-	-	97	188	1.2E-35
PANTHER	PTHR32305	-	-	-	71	640	3.9E-73
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	30	323	1.3E-78
Gene3D	G3DSA:2.30.110.50	-	-	-	25	327	1.1E-86
Pfam	PF06715	Gp5 C-terminal repeat (3 copies)	IPR010609	Gp5, C-terminal	561	584	1.8E-6
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	339	439	5.7E-42
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	425	637	4.55E-45
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	348	435	6.02E-33
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	19	184	1.64E-45
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	369	436	3.3E-16
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	189	348	2.21E-35
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	24	487	1.6E-122
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	16	505	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.