Pseudomonas fluorescens F113, PSF113_3141

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006526 arginine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01118
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051287 NAD binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01118
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc L-arginine biosynthesis IV (archaebacteria) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pfe01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01210 2-Oxocarboxylic acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00859 Semialdhyde_dh_3 IPR000534 Semialdehyde dehydrogenase, NAD-binding 5 106 6.0E-16
SUPERFAMILY SSF55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain - - 117 289 8.69E-36
NCBIfam TIGR01851 JCVI: N-acetyl-gamma-glutamyl-phosphate reductase IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 4 306 1.0E-120
Gene3D G3DSA:3.30.360.10 Dihydrodipicolinate Reductase; domain 2 - - 121 293 7.4E-39
Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 2 308 49.846905
Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain IPR000534 Semialdehyde dehydrogenase, NAD-binding 44 104 1.1E-11
Gene3D G3DSA:3.40.50.720 - - - 5 120 5.3E-19
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 6 138 1.67E-29
PANTHER PTHR32338 N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED - - 47 306 1.2E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.