Pseudomonas fluorescens F113, PSF113_4286

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0016998 cell wall macromolecule catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004568 chitinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006032 chitin catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc chitin degradation II (Vibrio) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc chitin degradation III (Serratia) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc chitin degradation I (archaea) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR34408 FAMILY PROTEIN, PUTATIVE-RELATED - - 3 182 1.1E-17
CDD cd00325 chitinase_GH19 - - 3 165 4.07981E-22
SUPERFAMILY SSF53955 Lysozyme-like IPR023346 Lysozyme-like domain superfamily 2 185 4.5E-47
Pfam PF00182 Chitinase class I IPR000726 Glycoside hydrolase, family 19, catalytic 39 142 6.0E-6
Gene3D G3DSA:1.10.530.10 - - - 3 183 2.7E-38

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.