Pseudomonas fluorescens F113, PSF113_4314
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008270 | zinc ion binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF01258
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01258 | Prokaryotic dksA/traR C4-type zinc finger | IPR000962 | Zinc finger, DksA/TraR C4-type | 37 | 64 | 1.4E-10 |
| Gene3D | G3DSA:1.20.120.910 | - | - | - | 7 | 74 | 2.6E-5 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | - | - | 37 | 72 | 1.71E-6 |
| NCBIfam | TIGR02419 | JCVI: phage/conjugal plasmid C-4 type zinc finger protein, TraR family | IPR012783 | Zinc finger, C4 DksA/TraR-type | 3 | 67 | 2.6E-20 |
| PANTHER | PTHR38777 | FELS-2 PROPHAGE PROTEIN | - | - | 1 | 71 | 1.3E-13 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.