Pseudomonas fluorescens F113, PSF113_5550 (trmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006400 tRNA modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR23417
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53335
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008176 tRNA (guanine-N7-)-methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR23417
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.150:FF:000035 tRNA (guanine-N(7)-)-methyltransferase - - 28 241 7.8E-65
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 32 241 9.9E-67
NCBIfam TIGR00091 JCVI: tRNA (guanosine(46)-N7)-methyltransferase TrmB IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type 54 240 4.1E-59
PANTHER PTHR23417 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type 21 239 2.5E-46
Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type 26 240 29.674931
CDD cd02440 AdoMet_MTases - - 68 179 1.44667E-5
Pfam PF02390 Putative methyltransferase IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type 66 235 4.4E-54
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 19 239 3.1E-38

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.