Pseudomonas fluorescens F113, PSF113_5920 (yidC)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01900	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0032977	membrane insertase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01900	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfe02024	Quorum sensing	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfe03060	Protein export	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfe03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Hamap	MF_01810	Membrane protein insertase YidC [yidC].	IPR019998	Membrane insertase YidC	4	551	25.36377
NCBIfam	TIGR03592	JCVI: membrane protein insertase YidC	IPR028055	Membrane insertase YidC/Oxa/ALB, C-terminal	370	549	3.4E-72
PRINTS	PR00701	60kDa inner membrane protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	341	361	8.6E-99
CDD	cd20070	5TM_YidC_Alb3	IPR047196	Membrane insertase YidC/ALB, C-terminal	372	549	1.7339E-100
PRINTS	PR00701	60kDa inner membrane protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	88	109	8.6E-99
PRINTS	PR00701	60kDa inner membrane protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	432	455	8.6E-99
PRINTS	PR00701	60kDa inner membrane protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	515	538	8.6E-99
Gene3D	G3DSA:2.70.98.90	-	IPR038221	YidC, periplasmic domain superfamily	80	351	1.9E-74
PRINTS	PR01900	YidC translocation/secretion protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	356	372	5.1E-29
PRINTS	PR01900	YidC translocation/secretion protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	485	500	5.1E-29
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	43	72	-
PRINTS	PR00701	60kDa inner membrane protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	2	23	8.6E-99
PRINTS	PR00701	60kDa inner membrane protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	235	253	8.6E-99
PRINTS	PR01900	YidC translocation/secretion protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	504	528	5.1E-29
Pfam	PF02096	60Kd inner membrane protein	IPR028055	Membrane insertase YidC/Oxa/ALB, C-terminal	371	549	4.7E-62
PRINTS	PR00701	60kDa inner membrane protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	479	501	8.6E-99
PANTHER	PTHR12428	OXA1	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	345	554	4.8E-62
Pfam	PF14849	YidC periplasmic domain	IPR028053	Membrane insertase YidC, N-terminal	83	360	3.1E-88
PRINTS	PR00701	60kDa inner membrane protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	179	199	8.6E-99
NCBIfam	TIGR03593	JCVI: membrane protein insertase, YidC/Oxa1 family, N-terminal domain	IPR028053	Membrane insertase YidC, N-terminal	4	369	1.8E-114
PRINTS	PR00701	60kDa inner membrane protein signature	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	268	283	8.6E-99
CDD	cd19961	EcYidC-like_peri	IPR028053	Membrane insertase YidC, N-terminal	81	347	1.80296E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.