Pseudomonas fluorescens SBW25, PFLU0059
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0020037 | heme binding |
Inferred from Sequence Model
Term mapped from: InterPro:PR01165
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PR01165
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009060 | aerobic respiration |
Inferred from Sequence Model
Term mapped from: InterPro:PR01165
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0015990 | electron transport coupled proton transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02891
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0045277 | respiratory chain complex IV |
Inferred from Sequence Model
Term mapped from: InterPro:cd01663
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004129 | cytochrome-c oxidase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR01165
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG (InterPro) | 00190 | Oxidative phosphorylation | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
| UniPathway | UPA00705 | oxidative phosphorylation | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 320 | 341 | 9.5E-121 |
| NCBIfam | TIGR02891 | JCVI: cytochrome c oxidase subunit I | IPR014241 | Cytochrome c oxidase, subunit I bacterial type | 24 | 527 | 0.0 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 383 | 402 | 9.5E-121 |
| CDD | cd01663 | Cyt_c_Oxidase_I | IPR033944 | Cytochrome c oxidase subunit I domain | 28 | 512 | 0.0 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 23 | 48 | 9.5E-121 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 97 | 121 | 9.5E-121 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 250 | 271 | 9.5E-121 |
| Pfam | PF00115 | Cytochrome C and Quinol oxidase polypeptide I | IPR000883 | Cytochrome c oxidase subunit I | 32 | 475 | 0.0 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 140 | 152 | 9.5E-121 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 170 | 188 | 9.5E-121 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 199 | 218 | 9.5E-121 |
| SUPERFAMILY | SSF81442 | Cytochrome c oxidase subunit I-like | IPR036927 | Cytochrome c oxidase-like, subunit I superfamily | 21 | 527 | 0.0 |
| Gene3D | G3DSA:1.20.210.10 | - | IPR036927 | Cytochrome c oxidase-like, subunit I superfamily | 10 | 528 | 0.0 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 296 | 311 | 9.5E-121 |
| FunFam | G3DSA:1.20.210.10:FF:000004 | Cytochrome c oxidase subunit 1 | - | - | 12 | 528 | 0.0 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 355 | 373 | 9.5E-121 |
| PANTHER | PTHR10422 | CYTOCHROME C OXIDASE SUBUNIT 1 | IPR000883 | Cytochrome c oxidase subunit I | 21 | 528 | 0.0 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 70 | 93 | 9.5E-121 |
| PRINTS | PR01165 | Cytochrome c oxidase subunit I signature | IPR000883 | Cytochrome c oxidase subunit I | 433 | 454 | 9.5E-121 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.