Pseudomonas fluorescens SBW25, PFLU0463 (rfaC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016757 | transferase activity, transferring glycosyl groups |
Inferred from Sequence Model
Term mapped from: InterPro:PF01075
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0008920 | lipopolysaccharide heptosyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02193
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009244 | lipopolysaccharide core region biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02193
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG (InterPro) | 00231 | Puromycin biosynthesis | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
| UniPathway | UPA00958 | LPS core biosynthesis | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | - | - | 165 | 350 | 1.9E-43 |
| NCBIfam | TIGR02193 | JCVI: lipopolysaccharide heptosyltransferase I | IPR011908 | Lipopolysaccharide heptosyltransferase I | 2 | 296 | 1.9E-112 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | - | - | 1 | 347 | 5.96E-84 |
| PANTHER | PTHR30160 | TETRAACYLDISACCHARIDE 4'-KINASE-RELATED | - | - | 1 | 348 | 2.3E-68 |
| FunFam | G3DSA:3.40.50.2000:FF:000106 | Lipopolysaccharide heptosyltransferase 1 | - | - | 167 | 316 | 5.1E-65 |
| CDD | cd03789 | GT9_LPS_heptosyltransferase | IPR002201 | Glycosyl transferase, family 9 | 2 | 343 | 1.03786E-66 |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | - | - | 1 | 162 | 4.0E-46 |
| Pfam | PF01075 | Glycosyltransferase family 9 (heptosyltransferase) | IPR002201 | Glycosyl transferase, family 9 | 75 | 313 | 2.3E-72 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.