Pseudomonas fluorescens SBW25, PFLU1199
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF118196 | YaeB-like | IPR036413 | YaeB-like superfamily | 1 | 221 | 1.31E-73 |
| Gene3D | G3DSA:3.30.2310.10 | - | - | - | 137 | 224 | 1.3E-18 |
| CDD | cd09281 | UPF0066 | IPR023370 | TrmO-like, N-terminal domain | 7 | 133 | 1.25079E-58 |
| Pfam | PF18389 | TrmO C-terminal domain | IPR041369 | TrmO, C-terminal | 155 | 216 | 5.1E-17 |
| Pfam | PF01980 | tRNA-methyltransferase O | IPR023370 | TrmO-like, N-terminal domain | 21 | 138 | 6.9E-45 |
| PANTHER | PTHR12818 | UNCHARACTERIZED | IPR040372 | YaeB-like | 2 | 227 | 8.6E-62 |
| NCBIfam | TIGR00104 | JCVI: tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | IPR023370 | TrmO-like, N-terminal domain | 1 | 143 | 9.4E-47 |
| Gene3D | G3DSA:2.40.30.70 | - | IPR036414 | YaeB, N-terminal domain superfamily | 1 | 136 | 3.8E-45 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.