Pseudomonas fluorescens SBW25, PFLU1301
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF51261 | Duplicated hybrid motif | IPR011055 | Duplicated hybrid motif | 59 | 275 | 5.75E-54 |
| Gene3D | G3DSA:2.70.70.10 | Glucose Permease (Domain IIA) | IPR011055 | Duplicated hybrid motif | 135 | 276 | 2.0E-38 |
| Pfam | PF01551 | Peptidase family M23 | IPR016047 | Peptidase M23 | 178 | 271 | 2.7E-31 |
| FunFam | G3DSA:2.70.70.10:FF:000010 | M23 family peptidase | - | - | 118 | 276 | 8.3E-52 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 136 | 156 | - |
| SMART | SM00257 | LysM_2 | IPR018392 | LysM domain | 58 | 102 | 5.8E-10 |
| Pfam | PF01476 | LysM domain | IPR018392 | LysM domain | 59 | 100 | 3.0E-13 |
| CDD | cd00118 | LysM | IPR018392 | LysM domain | 59 | 100 | 3.37553E-12 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | IPR036779 | LysM domain superfamily | 57 | 100 | 3.4E-14 |
| CDD | cd12797 | M23_peptidase | - | - | 178 | 262 | 9.05048E-30 |
| PANTHER | PTHR21666 | PEPTIDASE-RELATED | - | - | 131 | 275 | 7.7E-37 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.