Pseudomonas fluorescens SBW25, PFLU4360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000255 | allantoin metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03164
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| UniPathway | UPA00394 | urate degradation | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF158694 | UraD-Like | IPR036778 | Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily | 11 | 170 | 2.75E-51 |
| Gene3D | G3DSA:1.10.3330.10 | - | IPR036778 | Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily | 8 | 171 | 1.0E-48 |
| NCBIfam | TIGR03164 | JCVI: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | IPR017580 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 | 13 | 169 | 6.5E-69 |
| Pfam | PF09349 | OHCU decarboxylase | IPR018020 | Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | 11 | 168 | 8.3E-45 |
| PANTHER | PTHR43466 | 2-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE DECARBOXYLASE-RELATED | - | - | 2 | 171 | 5.8E-52 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.