Pseudomonas fluorescens SBW25, PFLU5089
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006935 | chemotaxis |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01440
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0050568 | protein-glutamine glutaminase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01440
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.1330.200 | - | IPR038592 | CheD-like superfamily | 7 | 162 | 9.6E-48 |
| Hamap | MF_01440 | Chemoreceptor glutamine deamidase CheD [cheD]. | IPR005659 | Chemoreceptor glutamine deamidase CheD | 4 | 161 | 23.617809 |
| Pfam | PF03975 | CheD chemotactic sensory transduction | IPR005659 | Chemoreceptor glutamine deamidase CheD | 52 | 156 | 2.9E-22 |
| CDD | cd16352 | CheD | IPR005659 | Chemoreceptor glutamine deamidase CheD | 9 | 156 | 6.24288E-60 |
| PANTHER | PTHR35147 | CHEMORECEPTOR GLUTAMINE DEAMIDASE CHED-RELATED | IPR005659 | Chemoreceptor glutamine deamidase CheD | 6 | 157 | 2.1E-34 |
| SUPERFAMILY | SSF64438 | CNF1/YfiH-like putative cysteine hydrolases | IPR011324 | Cytotoxic necrotizing factor-like, catalytic | 9 | 162 | 2.01E-40 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.