Pseudomonas fluorescens SBW25, PFLU5654 (ltaE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004793 threonine aldolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038940
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01212
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006567 threonine catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038940
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01212
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 7 344 1.04E-99
Pfam PF01212 Beta-eliminating lyase IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase 7 297 1.4E-76
CDD cd06502 TA_like - - 7 343 0.0
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 9 336 0.0
FunFam G3DSA:3.40.640.10:FF:000087 L-threonine aldolase - - 17 255 0.0
PIRSF PIRSF038940 Low_specificity_LTA IPR026273 Low specificity L-threonine aldolase, bacteria 5 346 0.0
FunFam G3DSA:3.90.1150.10:FF:000069 L-threonine aldolase - - 252 336 4.4E-49
PANTHER PTHR48097 L-THREONINE ALDOLASE-RELATED - - 6 345 4.9E-46
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 17 255 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.