Pseudomonas fluorescens SBW25, PFLU6004

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0002161 aminoacyl-tRNA editing activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04073
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd04332 YbaK_like - - 30 149 1.87489E-11
PANTHER PTHR33525:SF6 HDOD DOMAIN PROTEIN - - 15 464 1.6E-117
Pfam PF04073 Aminoacyl-tRNA editing domain IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain 29 140 2.9E-14
PANTHER PTHR33525 - - - 15 464 1.6E-117
SUPERFAMILY SSF55826 YbaK/ProRS associated domain IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily 24 143 2.62E-12
PIRSF PIRSF036888 HDGYPm_UCP036888 IPR014627 Uncharacterised conserved protein UCP036888, signal transduction HD-GYP-like, PA5346 type 1 465 0.0
Gene3D G3DSA:3.90.960.10 - IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily 11 152 7.8E-27
Pfam PF08668 HDOD domain IPR013976 Metal-dependent hydrolase HDOD 194 394 1.3E-46
SUPERFAMILY SSF109604 HD-domain/PDEase-like - - 179 450 1.05E-62
Gene3D G3DSA:1.10.3210.10 Hypothetical protein af1432 - - 156 463 8.8E-88

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.