Pseudomonas fluorescens SBW25, PFLU6026

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 24 506 0.0
SUPERFAMILY SSF69279 Phage tail proteins - - 189 362 1.87E-36
FunFam G3DSA:3.55.50.10:FF:000001 Actin cross-linking toxin VgrG1 - - 98 189 1.3E-42
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 386 453 1.2E-14
FunFam G3DSA:2.40.50.230:FF:000001 Type VI secretion protein VgrG - - 355 457 3.1E-62
Gene3D G3DSA:4.10.220.110 - - - 224 286 0.0
Gene3D G3DSA:2.30.110.50 - - - 15 331 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 463 483 -
MobiDBLite mobidb-lite consensus disorder prediction - - 616 646 -
Gene3D G3DSA:3.55.50.10 - - - 98 189 0.0
SUPERFAMILY SSF69349 Phage fibre proteins - - 442 617 3.45E-40
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 355 457 5.8E-45
PANTHER PTHR32305 - - - 36 525 3.0E-90
SUPERFAMILY SSF69279 Phage tail proteins - - 11 184 3.19E-60
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 11 523 0.0
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 364 452 4.45E-35
Pfam PF05954 Phage tail baseplate hub (GPD) - - 30 329 4.3E-104
MobiDBLite mobidb-lite consensus disorder prediction - - 463 485 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.