Pseudomonas putida GB-1, PputGB1_0118

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015990 electron transport coupled proton transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02891
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01165
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009060 aerobic respiration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01165
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0045277 respiratory chain complex IV
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01663
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01165
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01165
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppg01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.20.210.10:FF:000004 Cytochrome c oxidase subunit 1 - - 13 529 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 200 219 1.2E-121
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 71 94 1.2E-121
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 384 403 1.2E-121
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 251 272 1.2E-121
Gene3D G3DSA:1.20.210.10 - IPR036927 Cytochrome c oxidase-like, subunit I superfamily 11 529 0.0
PANTHER PTHR10422 CYTOCHROME C OXIDASE SUBUNIT 1 IPR000883 Cytochrome c oxidase subunit I 22 529 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 434 455 1.2E-121
SUPERFAMILY SSF81442 Cytochrome c oxidase subunit I-like IPR036927 Cytochrome c oxidase-like, subunit I superfamily 22 528 0.0
CDD cd01663 Cyt_c_Oxidase_I IPR033944 Cytochrome c oxidase subunit I domain 29 513 0.0
NCBIfam TIGR02891 JCVI: cytochrome c oxidase subunit I IPR014241 Cytochrome c oxidase, subunit I bacterial type 25 528 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 297 312 1.2E-121
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 356 374 1.2E-121
Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I IPR000883 Cytochrome c oxidase subunit I 33 476 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 98 122 1.2E-121
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 141 153 1.2E-121
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 321 342 1.2E-121
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 24 49 1.2E-121
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 171 189 1.2E-121

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.