Pseudomonas putida GB-1, PputGB1_0535

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd16341
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF018296 Format_dh_formtn_FdhE IPR006452 Formate dehydrogenase accessory protein 1 306 1.0E-108
SUPERFAMILY SSF144020 FdhE-like IPR024064 FdhE-like superfamily 18 305 2.09E-82
Pfam PF04216 Protein involved in formate dehydrogenase formation IPR006452 Formate dehydrogenase accessory protein 16 303 1.1E-91
CDD cd16341 FdhE IPR006452 Formate dehydrogenase accessory protein 45 293 1.45858E-56
Gene3D G3DSA:3.90.1670.10 - IPR024064 FdhE-like superfamily 18 306 2.6E-79
PANTHER PTHR37689 PROTEIN FDHE IPR006452 Formate dehydrogenase accessory protein 1 306 4.1E-74
Hamap MF_00611 Protein FdhE [fdhE]. IPR006452 Formate dehydrogenase accessory protein 2 306 35.956635
NCBIfam TIGR01562 JCVI: formate dehydrogenase accessory protein FdhE IPR006452 Formate dehydrogenase accessory protein 3 305 1.2E-103

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.