Pseudomonas putida GB-1, PputGB1_1677 (fadA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016746 transferase activity, transferring acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.47.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016042 lipid catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01620
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003988 acetyl-CoA C-acyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01620
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01620
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006631 fatty acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01620
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00751
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppg00280 Valine, leucine and isoleucine degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01212 Fatty acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00281 Geraniol degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00071 Fatty acid degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00592 alpha-Linolenic acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00751 thiolase IPR002155 Thiolase 9 390 0.0
PANTHER PTHR43853 3-KETOACYL-COA THIOLASE, PEROXISOMAL - - 3 391 6.8E-128
NCBIfam TIGR02445 JCVI: acetyl-CoA C-acyltransferase FadA IPR012805 Acetyl-CoA C-acyltransferase FadA 7 391 0.0
Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. IPR012805 Acetyl-CoA C-acyltransferase FadA 5 391 59.437496
Pfam PF02803 Thiolase, C-terminal domain IPR020617 Thiolase, C-terminal 266 390 1.6E-48
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 266 390 9.19E-43
PIRSF PIRSF000429 Ac-CoA_Ac_transf IPR002155 Thiolase 2 391 0.0
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 7 271 0.0
NCBIfam TIGR01930 JCVI: acetyl-CoA C-acyltransferase IPR002155 Thiolase 10 389 0.0
Pfam PF00108 Thiolase, N-terminal domain IPR020616 Thiolase, N-terminal 8 257 2.2E-85
FunFam G3DSA:3.40.47.10:FF:000010 Acetyl-CoA acetyltransferase (Thiolase) - - 4 390 0.0
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 4 260 3.01E-78
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 138 384 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.