Pseudomonas putida GB-1, PputGB1_2205

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006725	cellular aromatic compound metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF001486	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppg00362	Benzoate degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg01220	Degradation of aromatic compounds	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR03221	JCVI: muconolactone Delta-isomerase	IPR003464	Muconolactone delta-isomerase	2	91	2.4E-46
PIRSF	PIRSF001486	CatC	IPR003464	Muconolactone delta-isomerase	1	94	7.0E-45
Pfam	PF02426	Muconolactone delta-isomerase	IPR026029	Muconolactone isomerase domain	1	90	6.3E-38
Gene3D	G3DSA:3.30.70.1060	Dimeric alpha+beta barrel	-	-	1	94	2.4E-34
SUPERFAMILY	SSF54909	Dimeric alpha+beta barrel	IPR011008	Dimeric alpha-beta barrel	1	95	2.95E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.