Pseudomonas putida GB-1, PputGB1_2693

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01186
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01186
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0031460 glycine betaine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01186
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppg02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43869 GLYCINE BETAINE/PROLINE BETAINE TRANSPORT SYSTEM ATP-BINDING PROTEIN PROV - - 7 384 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 36 294 2.9E-77
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 46 272 7.67E-76
FunFam G3DSA:3.40.50.300:FF:000201 Glycine betaine/L-proline ABC transporter ATP-binding protein - - 35 288 2.8E-116
CDD cd03294 ABC_Pro_Gly_Betaine - - 8 276 0.0
SUPERFAMILY SSF54631 CBS-domain pair IPR046342 CBS domain superfamily 307 384 1.43E-5
NCBIfam TIGR01186 JCVI: betaine/proline/choline family ABC transporter ATP-binding protein IPR005892 Glycine betaine/proline betaine transport system ATP-binding protein ProV-like 40 384 3.3E-122
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 49 195 1.4E-33
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 56 253 1.2E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.