Pseudomonas putida GB-1, PputGB1_5227
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF03544
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PRINTS | PR01217 | Proline rich extensin signature | - | - | 73 | 85 | 6.0E-11 |
| PANTHER | PTHR33446 | PROTEIN TONB-RELATED | - | - | 52 | 266 | 5.7E-22 |
| NCBIfam | TIGR01352 | JCVI: TonB family C-terminal domain | IPR006260 | TonB/TolA, C-terminal | 189 | 265 | 5.2E-25 |
| Gene3D | G3DSA:3.30.1150.10 | - | - | - | 173 | 265 | 1.9E-24 |
| PRINTS | PR01217 | Proline rich extensin signature | - | - | 127 | 143 | 6.0E-11 |
| Pfam | PF03544 | Gram-negative bacterial TonB protein C-terminal | IPR037682 | TonB, C-terminal | 187 | 265 | 4.2E-25 |
| PRINTS | PR01217 | Proline rich extensin signature | - | - | 97 | 118 | 6.0E-11 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 106 | 173 | - |
| PRINTS | PR01217 | Proline rich extensin signature | - | - | 144 | 161 | 6.0E-11 |
| SUPERFAMILY | SSF74653 | TolA/TonB C-terminal domain | - | - | 181 | 263 | 5.62E-24 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.