Pseudomonas putida GB-1, PputGB1_5431

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0046034	ATP metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF50615	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01347	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00006	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0015986	ATP synthesis coupled proton transport	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01347	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00382	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:1902600	proton transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF50615	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01347	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
MetaCyc		ATP biosynthesis	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
KEGG	ppg01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg00190	Oxidative phosphorylation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF02874	ATP synthase alpha/beta family, beta-barrel domain	IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	6	71	3.2E-21
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	75	345	5.46E-90
CDD	cd18115	ATP-synt_F1_beta_N	-	-	2	74	2.57739E-34
FunFam	G3DSA:1.10.1140.10:FF:000001	ATP synthase subunit beta	-	-	343	458	1.4E-62
Gene3D	G3DSA:1.10.1140.10	-	IPR024034	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	344	458	7.7E-61
SUPERFAMILY	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase	-	-	343	457	3.4E-53
CDD	cd01133	F1-ATPase_beta_CD	-	-	75	345	0.0
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	74	343	1.4E-113
CDD	cd18110	ATP-synt_F1_beta_C	-	-	347	454	8.65805E-77
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	140	325	6.1E-4
Gene3D	G3DSA:2.40.10.170	-	-	-	1	73	6.6E-30
FunFam	G3DSA:3.40.50.300:FF:000004	ATP synthase subunit beta	-	-	74	342	0.0
SUPERFAMILY	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase	IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	2	72	4.97E-25
PANTHER	PTHR15184	ATP SYNTHASE	-	-	3	458	0.0
Pfam	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	128	340	4.4E-63
NCBIfam	TIGR01039	JCVI: F0F1 ATP synthase subunit beta	IPR005722	ATP synthase, F1 complex, beta subunit	3	458	0.0
Hamap	MF_01347	ATP synthase subunit beta [atpB].	IPR005722	ATP synthase, F1 complex, beta subunit	1	458	56.323135

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.