Pseudomonas putida S16, PPS_1060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006164 | purine nucleotide biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11911
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003938 | IMP dehydrogenase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11911
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00478
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | inosine 5'-phosphate degradation | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | ppt00230 | Purine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppt01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | adenosine nucleotides degradation I | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | ppt01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | guanosine ribonucleotides <i>de novo</i> biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00571 | CBS domain | IPR000644 | CBS domain | 95 | 139 | 7.3E-8 |
| NCBIfam | TIGR01302 | JCVI: IMP dehydrogenase | IPR005990 | Inosine-5'-monophosphate dehydrogenase | 8 | 456 | 0.0 |
| SMART | SM00116 | cbs_1 | IPR000644 | CBS domain | 96 | 143 | 6.2E-7 |
| Hamap | MF_01964 | Inosine-5'-monophosphate dehydrogenase [guaB]. | IPR005990 | Inosine-5'-monophosphate dehydrogenase | 8 | 488 | 84.686966 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | IPR013785 | Aldolase-type TIM barrel | 2 | 488 | 0.0 |
| SMART | SM01240 | IMPDH_2 | - | - | 7 | 475 | 0.0 |
| Pfam | PF00571 | CBS domain | IPR000644 | CBS domain | 148 | 201 | 9.3E-4 |
| Pfam | PF00478 | IMP dehydrogenase / GMP reductase domain | IPR001093 | IMP dehydrogenase/GMP reductase | 8 | 475 | 0.0 |
| SUPERFAMILY | SSF51412 | Inosine monophosphate dehydrogenase (IMPDH) | - | - | 2 | 479 | 2.49E-128 |
| SUPERFAMILY | SSF54631 | CBS-domain pair | IPR046342 | CBS domain superfamily | 63 | 204 | 1.83E-25 |
| CDD | cd04601 | CBS_pair_IMPDH | - | - | 94 | 202 | 2.99913E-49 |
| PANTHER | PTHR11911 | INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED | IPR005990 | Inosine-5'-monophosphate dehydrogenase | 5 | 483 | 0.0 |
| FunFam | G3DSA:3.20.20.70:FF:000003 | GMP reductase | - | - | 1 | 488 | 0.0 |
| SMART | SM00116 | cbs_1 | IPR000644 | CBS domain | 157 | 205 | 3.0E-4 |
| CDD | cd00381 | IMPDH | IPR001093 | IMP dehydrogenase/GMP reductase | 8 | 464 | 0.0 |
| PIRSF | PIRSF000130 | IMPDH | IPR005990 | Inosine-5'-monophosphate dehydrogenase | 1 | 489 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.