Pseudomonas putida S16, PPS_1700

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000429
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016746 transferase activity, transferring acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.47.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006631 fatty acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01620
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01620
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003988 acetyl-CoA C-acyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01620
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016042 lipid catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01620
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppt01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt00281 Geraniol degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt00280 Valine, leucine and isoleucine degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01212 Fatty acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt00592 alpha-Linolenic acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt00071 Fatty acid degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00751 thiolase IPR002155 Thiolase 9 390 0.0
Pfam PF02803 Thiolase, C-terminal domain IPR020617 Thiolase, C-terminal 266 390 1.6E-48
PANTHER PTHR43853 3-KETOACYL-COA THIOLASE, PEROXISOMAL - - 3 391 6.5E-128
FunFam G3DSA:3.40.47.10:FF:000010 Acetyl-CoA acetyltransferase (Thiolase) - - 4 390 0.0
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 266 390 9.19E-43
NCBIfam TIGR02445 JCVI: acetyl-CoA C-acyltransferase FadA IPR012805 Acetyl-CoA C-acyltransferase FadA 7 391 0.0
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 4 260 6.01E-78
Pfam PF00108 Thiolase, N-terminal domain IPR020616 Thiolase, N-terminal 8 257 8.1E-85
PIRSF PIRSF000429 Ac-CoA_Ac_transf IPR002155 Thiolase 2 391 0.0
NCBIfam TIGR01930 JCVI: acetyl-CoA C-acyltransferase IPR002155 Thiolase 10 389 0.0
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 7 271 0.0
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 138 384 0.0
Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. IPR012805 Acetyl-CoA C-acyltransferase FadA 5 391 59.401405

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.