Pseudomonas putida S16, PPS_2305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02819
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppt01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt00625 Chloroalkane and chloroalkene degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt00680 Methane metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR02819 JCVI: formaldehyde dehydrogenase, glutathione-independent IPR014184 Formaldehyde dehydrogenase, glutathione-independent 2 389 0.0
Gene3D G3DSA:3.90.180.10 - - - 8 375 0.0
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 156 350 5.26E-68
CDD cd08282 PFDH_like - - 2 386 0.0
PANTHER PTHR42813 ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE - - 2 387 2.0E-110
Gene3D G3DSA:3.40.50.720 - - - 166 332 0.0
Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain 177 233 2.2E-5
Pfam PF08240 Alcohol dehydrogenase GroES-like domain IPR013154 Alcohol dehydrogenase-like, N-terminal 29 139 3.6E-26
SUPERFAMILY SSF50129 GroES-like IPR011032 GroES-like superfamily 2 182 2.11E-62

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.