Pseudomonas putida S16, PPS_5273

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0046034 ATP metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50615
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01347
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015986 ATP synthesis coupled proton transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01347
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1902600 proton transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50615
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00006
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01347
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppt00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.1140.10:FF:000001 ATP synthase subunit beta - - 343 458 4.3E-62
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 74 343 1.4E-113
Hamap MF_01347 ATP synthase subunit beta [atpB]. IPR005722 ATP synthase, F1 complex, beta subunit 1 458 56.199039
FunFam G3DSA:3.40.50.300:FF:000004 ATP synthase subunit beta - - 74 342 0.0
CDD cd01133 F1-ATPase_beta_CD - - 75 345 0.0
Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain 6 71 4.7E-21
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 75 345 5.46E-90
Gene3D G3DSA:1.10.1140.10 - IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal 344 458 1.2E-60
SUPERFAMILY SSF47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase - - 343 457 7.85E-53
SUPERFAMILY SSF50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily 2 72 7.32E-25
PANTHER PTHR15184 ATP SYNTHASE - - 3 458 0.0
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 140 325 6.1E-4
Gene3D G3DSA:2.40.10.170 - - - 1 73 1.6E-29
Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain 128 340 4.4E-63
CDD cd18110 ATP-synt_F1_beta_C - - 347 454 4.51825E-76
NCBIfam TIGR01039 JCVI: F0F1 ATP synthase subunit beta IPR005722 ATP synthase, F1 complex, beta subunit 3 458 0.0
CDD cd18115 ATP-synt_F1_beta_N - - 2 74 7.38695E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.