Pseudomonas putida BIRD-1, PPUBIRD1_0153

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00607
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR40942 - IPR002323 Cytochrome c, class IE 17 96 3.4E-27
PRINTS PR00607 Class IE cytochrome C signature IPR002323 Cytochrome c, class IE 69 81 2.9E-5
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 20 94 9.7E-13
PRINTS PR00607 Class IE cytochrome C signature IPR002323 Cytochrome c, class IE 41 51 2.9E-5
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 21 96 2.1E-16
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 19 97 1.1E-27
PRINTS PR00607 Class IE cytochrome C signature IPR002323 Cytochrome c, class IE 30 41 2.9E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.