Pseudomonas putida BIRD-1, PPUBIRD1_0405
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CCCTTGTAGGAGCGGGCTTGCCCGCGAA-N39-TTCGCGGGCAAGCCCGCTCCTACAAGGG | 469239 | 469333 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAAACCCGCCTGCC-N6-GGCAGGCGGGTTTT | 471318 | 471351 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GTAGGAGCGGGTTTACCCGCGAA-N58-TTCGCGGGTAAACCCGCTCCTAC | 471381 | 471484 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCCACCACCG-N34-CGGTGGTGGC | 471450 | 471503 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TTCGCGGGTAAACCCG-N62-CGGGTTTACCCGCGAA | 471462 | 471555 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 116 | 471322 | 471347 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |