Pseudomonas putida BIRD-1, PPUBIRD1_0642

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.720 - - - 1 228 2.6E-44
Pfam PF00106 short chain dehydrogenase IPR002347 Short-chain dehydrogenase/reductase SDR 6 191 7.4E-22
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 150 169 7.0E-14
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 121 137 7.0E-14
PANTHER PTHR45458 SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR - - 4 228 2.6E-47
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 5 228 7.22E-59
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 6 23 7.0E-14
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 171 188 7.0E-14
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 73 84 7.0E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.